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Analysis of 3-D Structures of Biological Molecules

Analyze and visualize 3-D structures of proteins and other biomolecules

Apps

Molecule Viewer

Display and manipulate 3-D molecule structure

Functions

`pdbtransform`	Apply linear transformation to 3-D structure of molecule
`pdbsuperpose`	Superpose 3-D structures of two proteins
`pdbread`	Read data from Protein Data Bank (PDB) file
`pdbwrite`	Write to file using Protein Data Bank (PDB) format

`molviewer`	Display and manipulate 3-D molecule structure
`pdbdistplot`	Visualize intermolecular distances in Protein Data Bank (PDB) file
`ramachandran`	Draw Ramachandran plot for Protein Data Bank (PDB) data
`evalrasmolscript`	Send RasMol script commands to Molecule Viewer window

Topics

Visualizing the Three-Dimensional Structure of a Molecule
This example shows how to display, inspect and annotate the three-dimensional structure of molecules.