亲戚 |
Perform Robust Multi-array Average (RMA) procedure onAffymetrixmicroarray probe-level data |
affygcrma |
Perform GC Robust Multi-array Average (GCRMA) procedure onAffymetrixmicroarray probe-level data |
affyinvarsetnorm |
Perform rank invariant set normalization on probe intensities from multipleAffymetrixCEL or DAT files |
affyprobeaffinities |
计算Affymetrixprobe affinities from their sequences and MM probe intensities |
affysnpintensitysplit |
SplitAffymetrixSNP probe intensity information for alleles A and B |
affysnpquartets |
创建SNP探测四重奏表的表Affymetrixprobe set |
探针值 |
Create table ofAffymetrixprobe set intensity values |
probesetlookup |
Look up information forAffymetrixprobe set |
probesetplot |
PlotAffymetrixprobe set intensity values |
probesetlink |
Display probe set information onNetAffxWeb site |
probelibraryinfo |
Create table of probe set library information |
rmabackadj |
Perform background adjustment onAffymetrixmicroarray probe-level data using Robust Multi-array Average (RMA) procedure |
rmasummary |
Calculate gene expression values fromAffymetrixmicroarray probe-level data using Robust Multi-array Average (RMA) procedure |
gcrma |
Perform GC Robust Multi-array Average (GCRMA) background adjustment, quantile normalization, and median-polish summarization onAffymetrixmicroarray probe-level data |
gcrmabackadj |
Perform GC Robust Multi-array Average (GCRMA) background adjustment onAffymetrixmicroarray probe-level data using sequence information |
zonebackadj |
Perform background adjustment onAffymetrixmicroarray probe-level data using zone-based method |
manorm |
Normalize microarray data |
quantilenorm |
Quantile normalization over multiple arrays |
mainvarsetnorm |
Perform rank invariant set normalization on gene expression values from two experimental conditions or phenotypes |
malowess |
Smooth microarray data using Lowess method |
exprprofrange |
Calculate range of gene expression profiles |
Exprprofvar |
Calculate variance of gene expression profiles |
geneentropyfilter |
Remove genes with low entropy expression values |
genelowvalfilter |
Remove gene profiles with low absolute values |
generangefilter |
Remove gene profiles with small profile ranges |
genevarfilter |
Filter genes with small profile variance |
maimage |
Spatial image for microarray data |
microplateplot |
Display visualization of microtiter plate |
ilmnbslookup |
Look upIlluminaBeadStudiotarget (probe) sequence and annotation information |
magetfield |
Extract data from microarray structure |